Albert Y. Zomaya

Mourad Elloumi

This book represents the most comprehensive and up-to-date collection of information on the topic of computational molecular biology. Bringing the most recent research into the forefront of discussion, Algorithms in Computational Molecular Biology studies the most important and useful algorithms currently being used in the field, and provides related problems. It also succeeds where other titles have failed, in offering a wide range of information from the introductory fundamentals right up to the latest, most advanced levels of study.

Techniques, Approaches and Applications

Algorithms in Computational Molecular Biology

A Min Tjoa

Abdelkader Hameurlain

Roland Wagner

Benno Stein

Michael Granitzer

Christin Seifert

This volume constitutes the refereed proceedings of the three workshops held at the 29th International Conference on Database and Expert Systems Applications, DEXA 2018, held in Regensburg, Germany, in September 2018: the Third International Workshop on Big Data Management in Cloud Systems, BDMICS 2018, the 9th International Workshop on Biological Knowledge Discovery from Data, BIOKDD, and the 15th International Workshop on Technologies for Information Retrieval, TIR. The 25 revised full papers were carefully reviewed and selected from 33 submissions. The papers discuss a range of topics including: parallel data management systems, consistency and privacy cloud computing and graph queries, web and domain corpora, NLP applications, social media and personalization

DEXA 2018 International Workshops, BDMICS, BIOKDD, and TIR, Regensburg, Germany, September 3–6, 2018, Proceedings

Database and Expert Systems Applications

The first comprehensive overview of preprocessing, mining,and postprocessing of biological data Molecular biology is undergoing exponential growth in both thevolume and complexity of biological data—and knowledgediscovery offers the capacity to automate complex search and dataanalysis tasks. This book presents a vast overview of the mostrecent developments on techniques and approaches in the field ofbiological knowledge discovery and data mining (KDD)—providingin-depth fundamental and technical field information on the mostimportant topics encountered. Written by top experts, Biological Knowledge DiscoveryHandbook: Preprocessing, Mining, and Postprocessing of BiologicalData covers the three main phases of knowledge discovery (datapreprocessing, data processing—also known as datamining—and data postprocessing) and analyzes both verificationsystems and discovery systems. BIOLOGICAL DATA PREPROCESSING Part A: Biological Data Management Part B: Biological Data Modeling Part C: Biological Feature Extraction Part D Biological Feature Selection BIOLOGICAL DATA MINING Part E: Regression Analysis of Biological Data Part F Biological Data Clustering Part G: Biological Data Classification Part H: Association Rules Learning from Biological Data Part I: Text Mining and Application to Biological Data Part J: High-Performance Computing for Biological DataMining Combining sound theory with practical applications in molecularbiology, Biological Knowledge Discovery Handbook is idealfor courses in bioinformatics and biological KDD as well as forpractitioners and professional researchers in computer science,life science, and mathematics.

Preprocessing, Mining and Postprocessing of Biological Data

Biological Knowledge Discovery Handbook

The 14 contributed chapters in this book survey the most recent developments in high-performance algorithms for NGS data, offering fundamental insights and technical information specifically on indexing, compression and storage; error correction; alignment; and assembly. The book will be of value to researchers, practitioners and students engaged with bioinformatics, computer science, mathematics, statistics and life sciences.

Techniques, Approaches, and Applications

Algorithms for Next-Generation Sequencing Data

Deep Learning for Biomedical Data Analysis

Robert Murphy

Josef Küng

Michal Linial

Kristan Schneider

Cristian Toma

This volume contains the papers which were selected for presentation at the second Bio- formatics Research and Development (BIRD) conference held in Vienna, Austria during July 7–9, 2008. BIRD covers a wide range of topics related to bioinformatics. This year sequence analysis and alignment, pathways, networks, systems biology, protein and RNA structure and function, gene expression/regulation and microarrays, databases and data integration, machine learning and data analysis were the subjects of main interest. The decisions of the Program Committee are based on the recommendations of at least three, up to five, reviews for each paper. As a result, 30 of the 61 submitted c- tributions could be accepted for the conference. We were happy to have three invited talks presented by experienced researchers providing visitors with a good overview but also some very important insights into the fascinating domain of bioinformatics. Abstracts and more information on these talks are provided in the conference program as well as at the conference site. In the second part of this volume the selected contributions of the two workshops which were held in parallel to the main conference are presented: Workshop on - namical Aspects of Perturbation, Intervention and Transition in Biological Systems – PETRIN 2008 and Workshop on Algorithms in Molecular Biology – ALBIO 2008 Poster presentations of the BIRD conference are in the companion proceedings published by the Trauner Verlag, Linz.

Second International Conference, BIRD 2008, Vienna, Austria, July 7-9, 2008 Proceedings

Bioinformatics Research and Development

Mourad Elloumi

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