Charles Delisi

Minoru Kanehisa

Satoru Miyano

Hermann-georg Holzhutter

This volume contains 31 peer-reviewed papers based on the presentations at the 7th International Annual Workshop on Bioinformatics and Systems Biology (IBSB 2007) held at the Human Genome Center, Institute of Medical Science, University of Tokyo from July 31 to August 2, 2007. This workshop started in 2001 as an event for doctoral students and young researchers to present and discuss their research results and approaches in bioinformatics and systems biology. It is part of a collaborative educational program involving leading institutions and leaders committed to the following programs and partner institutions:• Boston (Charles DeLisi) — Graduate Program in Bioinformatics, Boston University• Berlin (Herman-Georg Holzhütter) — The International Research Training Group (IRTG) “Genomics and Systems Biology of Molecular Networks”• Kyoto/Tokyo (Minoru Kanehisa/Satoru Miyano) — Joint Bioinformatics Education Program of Kyoto University and University of Tokyo.This volume is dedicated to the memory of Prof. Dr. Dr. h.c. Reinhart Heinrich, a former Professor at Humboldt University Berlin and a co-founder of this workshop./a

Genome Informatics 2007: Genome Informatics Series Vol. 18 - Proceedings Of The 7th Annual International Workshop On Bioinformatics And Systems Biology (Ibsb 2007)

Reinhart Heinrich

This volume contains 31 peer-reviewed papers based on the presentations at the 7th International Annual Workshop on Bioinformatics and Systems Biology (IBSB 2007) held at the Human Genome Center, Institute of Medical Science, University of Tokyo from July 31 to August 2, 2007. This workshop started in 2001 as an event for doctoral students and young researchers to present and discuss their research results and approaches in bioinformatics and systems biology.

Proceedings of the 7th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2007), Institute of Medical Science, University of Tokyo, Japan, 31 July-2 August 2007

Genome Informatics 2007

Tetsuo Asano

Takao Asano

Yoshihide Igarashi

Hiroshi Nagamochi

Subhash Suri

Today the cemented joint prosthesis operation is one of the most frequent procedures in orthopaedic surgery. During the past 30 years the individual steps of such an operation have been carefully validated and thus allow for a reproducible and standardized operation, including a reliable prognosis for the maintenance of the joint. This manual is a practical guide to a complication preventing cementing technique, cement fixation, maintenance of the bone and diamond technique. Clear drawings and diagrams guide the reader through the pre-operative, peri-operative and post-operative steps. The manual covers all possible complications and gives clear instructions, so as to prevent complications but also to cope with them if they occur. Finally, it covers all forensic criteria to be considered.

7th International Symposium, ISAAC '96, Osaka, Japan, December 16 - 18, 1996, Proceedings

Algorithms and Computation

Pavel Pevzner

Michael Waterman

Jill Mesirov

Simon Kasif

Sorin Istrail

This volume contains the papers presented at the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2005), which was held in Cambridge, Massachusetts, on May 14–18, 2005. The RECOMB conference series was started in 1997 by Sorin Istrail, Pavel Pevzner and Michael Waterman. The list of previous meetings is shown below in the s- tion “Previous RECOMB Meetings. ” RECOMB 2005 was hosted by the Broad Institute of MIT and Harvard, and Boston University’s Center for Advanced - nomic Technology, and was excellently organized by the Organizing Committee Co-chairs Jill Mesirov and Simon Kasif. This year, 217 papers were submitted, of which the Program Committee - lected 39 for presentation at the meeting and inclusion in this proceedings. Each submission was refereed by at least three members of the Program Committee. After the completion of the referees’ reports, an extensive Web-based discussion took place for making decisions. From RECOMB 2005, the Steering Committee decided to publish the proceedings as a volume of Lecture Notes in Bioinf- matics (LNBI) for which the founders of RECOMB are also the editors. The prominent volume number LNBI 3500 was assigned to this proceedings. The RECOMB conference series is closely associated with the Journal of Compu- tional Biology which traditionally publishes special issues devoted to presenting full versions of selected conference papers. The RECOMB Program Committee consistedof42members,aslistedonaseparatepage. Iwouldliketothank the RECOMB 2005 Program Committee members for their dedication and hard work.

9th Annual International Conference, RECOMB 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings

Research in Computational Molecular Biology

Alvis Brazma

Tatsuya Akutsu

High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, thus enabling large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, metabolic pathways, and gene expression profiles of normal and diseased tissues are rapidly being generated for human and model organisms. Bioinformatics is therefore gaining importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of the genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industry practitioners at the 6th Asia-Pacific Bioinformatics Conference held in Kyoto, Japan, in January 2008. Sample Chapter(s). Chapter 1: Recent Progress in Phylogenetic Combinatorics (185 KB). Contents: Recent Progress in Phylogenetic Combinatorics (A Dress); Predicting Nucleolar Proteins Using Support-Vector Machines (M Bod(r)n); Structure-Approximating Design of Stable Proteins in 2D HP Model Fortified by Cysteine Monomers (A H Khodabakhshi et al.); Seed Optimization Is No Easier than Optimal Golomb Ruler Design (B Ma & H Yao); Analysis of Structural Strand Asymmetry in Non-coding RNAs (J Wen et al.); Genome Halving with Double Cut and Join (R Warren & D Sankoff); Symbolic Approaches for Finding Control Strategies in Boolean Networks (C J Langmead & S K Jha); Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency (F Y L Chin et al.); and other papers. Readership: Academics, researchers, and graduate students in bioinformatics and computer science.

Kyoto, Japan, 14-17 January 2008

Proceedings of the 6th Asia-Pacific Bioinformatics Conference

Gary Benson

Ernst-walter Knapp

This volume contains 25 peer-reviewed papers based on the presentations at the 8th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2008) held at the Teikyo Hotel, Zeuten Lake, near Berlin, from June 9 to June 10, 2008. This workshop started in 2001 as an event for doctoral students and young researchers to present and discuss their research results and approaches in bioinformatics and systems biology. It is part of a collaborative educational program involving leading institutions and leaders committed to the following programs and partner institutions:• Boston (Gary Benson) — Graduate Program in Bioinformatics, Boston University• Berlin (Herman-Georg Holzhütter) — The International Research Training Group (IRTG) “Genomics and Systems Biology of Molecular Networks”• Kyoto/Tokyo (Minoru Kanehisa/Satoru Miyano) — Joint Bioinformatics Education Program of Kyoto University and University of Tokyo.

Genome Informatics 2008: Genome Informatics Series Vol. 20 - Proceedings Of The 8th International Workshop On Bioinformatics And Systems Biology (Ibsb 2008)

Ernst-Walter Knapp

Herman-Georg Holzhütter

This volume contains 25 peer-reviewed papers based on the presentations at the 8th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2008) held at the Teikyo Hotel, Zeuten Lake, near Berlin, from June 9 to June 10, 2008. This workshop started in 2001 as an event for doctoral students and young researchers to present and discuss their research results and approaches in bioinformatics and systems biology. It is part of a collaborative educational program involving leading institutions and leaders committed to the following programs and partner institutions: • Boston (Gary Benson) — Graduate Program in Bioinformatics, Boston University • Berlin (Herman-Georg Holzhütter) — The International Research Training Group (IRTG) “Genomics and Systems Biology of Molecular Networks” • Kyoto/Tokyo (Minoru Kanehisa/Satoru Miyano) — Joint Bioinformatics Education Program of Kyoto University and University of Tokyo.

Genome Informatics Series Vol. 20

Genome Informatics 2008

Edda Klipp

Scott Mohr

Iwona Wallach

This volume contains 17 peer-reviewed papers based on the presentations at the 9th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2009) held at the Life Science Engineering Building of Boston University from July 27 to 29, 2009. This workshop started in 2001 as a platform for doctoral students and young researchers to present and discuss their research results and approaches in bioinformatics and systems biology. It is part of a collaborative educational program involving leading institutions and leaders committed to the following institutions and programs:Boston University Graduate Program in BioinformaticsCharité - Universitätsmedizin BerlinFreie Universität BerlinGlobal COE Program — Center of Education and Research for Advanced Genome-Based Medicine, University of TokyoThe International Research Training Group (IRTG) Genomics and Systems Biology of Molecular NetworksInternational Research and Training Program on Bioinformatics and Systems Biology, Kyoto University Bioinformatics CenterMax-Delbrück Center for Molecular Medicine in BerlinMax Planck Institute for Molecular Genetics in BerlinMax Planck Institute of Molecular Plant Physiology in Potsdam/a

Genome Informatics 2009: Genome Informatics Series Vol. 22 - Proceedings Of The 9th Annual International Workshop On Bioinformatics And Systems Biology (Ibsb 2009)

Satoru Miyano

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